Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908040.1_cds_XP_016458185.1_51838
CDS Infomation

[gene=LOC107781884] [db_xref=GeneID:107781884] [protein=pectinesterase-like] [protein_id=XP_016458185.1] [location=complement(join(711..1393,1969..2959))] [gbkey=CDS]
Sequence

ATGGCTAACAAAATAGCCATTGCTGGCTTAGCCTCAATTCTTGTAGTGGCTTGTGTGGTA
GCAGCAGCTGTTACCATTACCAAAAGAAATAGCAGTGATTCATCATCTAGTAGTGGTGAT
CCTGTTTCAAATGATAGCCAAATTTCAACCTCTACAAAATCAGTAAAAGCAATGTGTCAA
CCTACTGATTACAAAGAAGCTTGTGAAAAGAGTCTTGCATCAGCCAAGAACACAAGTGAT
CCAAAAGAACTTATAAAAGTGGCATTTGAATCAACTATTACTGATATTAAAAATGCTATG
AAAAATACTAGCTTGATTCAAGAAGCTGCTAAAGATCCAAGAACCAAAGATGCTTTACAA
ACTTGTGAATCTCTTCTTAATGTCTCTATTGATGATTTAAGAAGGTCATTTGATAAAGTT
GGTACCTTTGATATTAACAAGATTAAGGATTATACTGATGATTTAAAAACATGGATTAGT
GCTTCAATTACTTATCAAGAAACTTGTTTAGATGCTTTTGAAAACACAACTGGTGAAACT
GGTGAGAAAATGAAAAAATTACTAAAGACTGCAGGGGAACTTACTAGTAATGGCCTTGCT
ATGGTTACTAGTTTTGGTGAAATGCTTACAAATTTGCATGTCCCTGGTATTAGCCGACGA
TTATTGACAACGGATTCTGAGTACACATCAGCGTTTGTTGAGGCCGGTTCTCGTAGGCTT
CTTCAAGTTTCTGGTGCAAAGCCTAATGCTGTGGTTGCACAAGATGGAAGTGGACAATAT
AAGACTATCAAAGAAGCACTTAAAGCTGTGCCCCCTAAGAATAACCAGACCTATGTTATC
TTAATCAAGGCTGGTGAATATAAGGAAATGGTTGATATTCCAAGAAGTATAACAAATGTT
GTGTTTATTGGTGAAGGCCCAACCAAGACCAAGATTACTGGTAATAAGAACTTTGCTGAT
GGCACTGGCACTTACCACACTGCCACCGTTGCCGTGAATGGAGATGGATTCGTAGCAAGG
GATATAGGATTCGAGAACACAGCAGGAGCAAAGAAGCACCAAGCAGTTGCGCTCCGCGTC
TCAGCTGACAAGACAGTTTTCTACAACTGCAACATAGATGGATACCAAGACACCCTCTAC
ACACATTCCTACAGACAATTCTACAAGGACTGTACCATAACAGGCACCATTGACTTCATC
TTTGGTGATGCATCGGTCGTGTTCCAGAACTGCAAGATGATTGTTAGAAAACCAGGTGAC
AATCAAGCTTGTATGGTCACTGCTCAAGGAAGAAAAGATCATCGCGGAGTTGGTGCAATT
GTATTGCAAAACTGCGATATCAGAGCTGAGCCAGCTTTTACTAGCGCACAGCCACCAATT
AAAGCGTACCTTGGACGTCCGTGGAAAGAATATTCAAGAACTATTATCATACAGTCGTAT
ATCGACGCCTTCATTGATCCTGAAGGGTGGGCTCCATGGAATGGAAATTTTGCACTTAAT
ACTTTGTTTTATGCAGAGTATCAGAATAGAGGACCAGGAGCAAACATTGATAAAAGAGTT
AAATGGGGTGGTTATAAAAGAAACATTTCACCACAAGAAGCTGAGAAATATGCTCCTGCT
CATTTTATTGACCAAGATAACTGGATTAAGAAGACTGGTATTTCCTACGCGTGA

Peptide Sequence

PEP ID

XP_016458185.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MANKIAIAGLASILVVACVVAAAVTITKRNSSDSSSSSGDPVSNDSQISTSTKSVKAMCQ
PTDYKEACEKSLASAKNTSDPKELIKVAFESTITDIKNAMKNTSLIQEAAKDPRTKDALQ
TCESLLNVSIDDLRRSFDKVGTFDINKIKDYTDDLKTWISASITYQETCLDAFENTTGET
GEKMKKLLKTAGELTSNGLAMVTSFGEMLTNLHVPGISRRLLTTDSEYTSAFVEAGSRRL
LQVSGAKPNAVVAQDGSGQYKTIKEALKAVPPKNNQTYVILIKAGEYKEMVDIPRSITNV
VFIGEGPTKTKITGNKNFADGTGTYHTATVAVNGDGFVARDIGFENTAGAKKHQAVALRV
SADKTVFYNCNIDGYQDTLYTHSYRQFYKDCTITGTIDFIFGDASVVFQNCKMIVRKPGD
NQACMVTAQGRKDHRGVGAIVLQNCDIRAEPAFTSAQPPIKAYLGRPWKEYSRTIIIQSY
IDAFIDPEGWAPWNGNFALNTLFYAEYQNRGPGANIDKRVKWGGYKRNISPQEAEKYAPA
HFIDQDNWIKKTGISYA

Transcript Sequence

Gene sequence data has not been registered.